PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0031s0037.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 166aa    MW: 17817.7 Da    PI: 4.6172
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0031s0037.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.35.9e-161765255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          y+G+r  ++  +Wv+eIr+p++   ++r++lg++ tae+Aa+a++aa+++l+g
  Kalax.0031s0037.1.p 17 IYRGIR--SRGPKWVSEIREPKK---TTRIWLGTYPTAEMAAAAYDAAALALKG 65
                         69***6..5678********854...5************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.29E-131674No hitNo description
PfamPF008471.4E-91665IPR001471AP2/ERF domain
SMARTSM003801.1E-271779IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-171773IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-261774IPR001471AP2/ERF domain
PROSITE profilePS5103219.4011773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
DQQRARAHSS WKHTHPIYRG IRSRGPKWVS EIREPKKTTR IWLGTYPTAE MAAAAYDAAA  60
LALKGSDAVL NFPECAGAYP APDSLSAADV RAAAEAAAAT RAPSQPINEE VQHGGEYVDE  120
DVILDMPNFL ADMAEGMMVS PPRMRPADDD DDTGEGSSSG LWDHP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002304466.13e-53AP2 domain-containing family protein
SwissprotQ9FJ902e-44ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLB9GW613e-53B9GW61_POPTR; AP2 domain-containing family protein
STRINGPOPTR_0003s12120.19e-53(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-33ERF family protein